So you are using the Harmony driver to configure your SmartRemote? That is where I can help you, What is on and what signal goes where is all in the Harmony driver.
Chris
That is a harder road to take especially if you are already on the Harmony ecosystem. You can grab a hub (and remote) all day long on eBay for buck and a quarter. Anyway good luck with your project. The Allonis software is a little mysterious at times but you can do great custom stuff with it with a little patience.
Chris