You update the Javascript via myDesigner in your custom project.
The Software Updater distributes the latest "out of the box" templates for your direct use, or as the basis for your custom webpage. The Javascript should be same (assume both were updated on same day).
If you aren't using any of the webpagename.html in your custom user interface, then you can ignore the smartremote-sample folder.
If you find your custom webpages aren't doing what they used to do, possibly a driver was updated, etc in myServer that you can try the smartremote-sample webpage to see if that works. If so, then you will need to compare what is different and add the difference (like a new command syntax) to your custom webpages to work again.
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